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Anal Chem ; 93(11): 4782-4787, 2021 03 23.
Статья в английский | MEDLINE | ID: covidwho-1114675

Реферат

The outbreak of coronavirus disease 2019 (COVID-19) caused by SARS CoV-2 is ongoing and a serious threat to global public health. It is essential to detect the disease quickly and immediately to isolate the infected individuals. Nevertheless, the current widely used PCR and immunoassay-based methods suffer from false negative results and delays in diagnosis. Herein, a high-throughput serum peptidome profiling method based on matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) is developed for efficient detection of COVID-19. We analyzed the serum samples from 146 COVID-19 patients and 152 control cases (including 73 non-COVID-19 patients with similar clinical symptoms, 33 tuberculosis patients, and 46 healthy individuals). After MS data processing and feature selection, eight machine learning methods were used to build classification models. A logistic regression machine learning model with 25 feature peaks achieved the highest accuracy (99%), with sensitivity of 98% and specificity of 100%, for the detection of COVID-19. This result demonstrated a great potential of the method for screening, routine surveillance, and diagnosis of COVID-19 in large populations, which is an important part of the pandemic control.


Тема - темы
COVID-19/diagnosis , Peptides/blood , SARS-CoV-2/metabolism , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Area Under Curve , COVID-19/metabolism , COVID-19/virology , Case-Control Studies , Discriminant Analysis , High-Throughput Screening Assays , Humans , Least-Squares Analysis , Machine Learning , Principal Component Analysis , ROC Curve , SARS-CoV-2/isolation & purification , Sensitivity and Specificity , Tuberculosis/metabolism , Tuberculosis/pathology
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